Condensed Matter Physics, 2010, vol. 13, No. 2, p. 23801:1-18
DOI:10.5488/CMP.13.23801
Title: Dynamics of molecular motors in reversible
burnt-bridge models Author(s):
 
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M.N. Artyomov
(Department of Chemistry, Massachusetts Institute of Technology,
Cambridge, MA 02139, USA)
,
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A.Yu. Morozov
(Department of Physics and Astronomy, University of California, Los
Angeles, Los Angeles, CA 90095, USA)
,
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A.B. Kolomeisky
(Department of Chemistry, Rice University, Houston, TX 77005, USA)
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Dynamic properties of molecular motors whose motion
is powered by interactions with specific lattice bonds are studied
theoretically with the help of discrete-state stochastic
"burnt-bridge" models. Molecular motors are depicted as random
walkers that can destroy or rebuild periodically distributed weak
connections ("bridges") when crossing them, with probabilities
p1 and p2 correspondingly. Dynamic properties, such as
velocities and dispersions, are obtained in exact and explicit form
for arbitrary values of parameters p1 and p2. For the
unbiased random walker, reversible burning of the bridges results in
a biased directed motion with a dynamic transition observed at very
small concentrations of bridges. In the case of backward biased
molecular motor its backward velocity is reduced and a reversal of
the direction of motion is observed for some range of parameters. It
is also found that the dispersion demonstrates a complex,
non-monotonic behavior with large fluctuations for some set of
parameters. Complex dynamics of the system is discussed by analyzing
the behavior of the molecular motors near burned bridges.
Key words: molecular motors, stochastic models, motor
proteins
PACS: 87.16.Ac
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